The set of bacterial genomes used in comparative analyses consists of
five E. coli strains, fourteen species of Salmonella, and several species
from related genera. For simplicity, the names were abbreviated in all
graphical representations as follows:
| (1-5) | ECO | Escherichia coli K-12 (E. coli) | |||
| (1-5) | ECH | Escherichia coli 0157:H7 (Enterohemorragic E. coli) | |||
| (1-5) | ECU | Escherichia coli CFT073 | |||
| (1-5) | ECA | Escherichia coli 042 | |||
| (1-5) | ECP | Escherichia coli E2348/69 | |||
| (1-5) | ESA | Enterobacter sakazaki | |||
| (1-5) | SHG | Shigella flexneri | |||
| (1-5) | SHD | Shigella dysenteriae M131649 | |||
| (1-5) | SHS | Shigella sonnei 53G | |||
| (1-5) | STM | Salmonella typhimurium LT2 | |||
| (1-5) | STY | Salmonella typhi CT18 | |||
| (2,4,5) | STT | Salmonella typhi Ty2 | |||
| (1-5) | SPA | Salmonella paratyphi A | |||
| (2,4,5) | SPB | Salmonella paratyphi B | |||
| (1-5) | SPC | Salmonella paratyphi C | |||
| (2,4,5) | SEP | Salmonella enteridits PT4 | |||
| (2,4,5) | SEN | Salmonella enteridits | |||
| (2,4,5) | SDU | Salmonella dublin | |||
| (2,4,5) | SGA | Salmonella gallinarum | |||
| (2,4,5) | SDI | Salmonella diarizonae | |||
| (2,4,5) | SAR | Salmonella arizonae | |||
| (2,4,5) | SBO | Salmonella bongori | |||
| (2,4,5) | SSL | Salmonella Typhimurium SL1344 | |||
| (1-5) | KPN | Klebsiella pneumoniae | |||
| (2,4,5) | ERC | Erwinia carotovora subspecies atroseptica SCRI1043 | |||
| (1-5) | YPE | Yersinia pestis | |||
| (1-5) | YEN | Yersinia enterocolitica (type 0:8) | |||
| (1,3) | VCH | Vibrio cholerae | |||
| (1,3) | PAE | Pseudomonas aeruginosa |
Species marked with a '1', '2', '3', '4' and '5' in the first column are
included in the comparative views using E. coli K-12 (1),
S. typhimurium LT2 (2), E. coli O157:H7 (3),
S. typhi CT18 (4), and S. paratyphi A (5),
respectively, as the reference genome.